Does WooCommerce Integrate With QuickBooks Online? Top Accounting & Bookkeeping Integration Software

Does WooCommerce integrate with QuickBooks Online? I get this question a lot.

The short answer is yes, it does.

And once you see how smooth it can be, you’ll never want to handle things manually again.

If you’ve ever spent hours copying and pasting transactions; from sales to refunds, from fees to taxes; you already know how frustrating and error-prone that can get.

Thankfully, there’s a simple, automated solution that saves you both time and sanity.

It’s called Link My Books, and it connects your WooCommerce store directly to QuickBooks Online (or Xero) for seamless accounting automation.

Free Trial Of Link My Books + Use Coupon Code VOVA20 To Get 50% OFF Link My Books for 3 Months

Watch the full guide here:

Why Manual Integration Is a Hassle

Let’s be honest, manual bookkeeping is a real chore.

If you’re handling your WooCommerce accounting by exporting CSVs or manually entering numbers into QuickBooks, you’re spending unnecessary hours every week.

Each order, refund, and fee needs to be entered correctly.

Sales tax has to match your reports.

Even small mismatches in payout deposits can throw your books off balance.

It’s not just time-consuming, it’s risky.

That’s exactly why automated integrations exist: to make sure your books stay clean, accurate, and consistent, without you having to micromanage every transaction.

How Link My Books Solves This

Now here’s where Link My Books comes in.

This app is a powerful connector tool designed to automate your e-commerce accounting.

It acts as the bridge between your WooCommerce store and QuickBooks Online, importing all your data automatically so you don’t have to.

Whether you’re recording sales, fees, refunds, or taxes; Link My Books does it for you.

Everything is summarized and posted to QuickBooks accurately.

Here’s what happens behind the scenes once you connect it:

1. Automatic syncing: WooCommerce payouts are matched with QuickBooks deposits.

2. Clear summaries: You get detailed breakdowns of your sales, refunds, fees, and taxes.

3. Accurate accounting: Built-in support for VAT, GST, and sales tax ensures every cent is tracked properly.

4. Instant clarity: Your books are always up to date, no more surprises at tax time.

It’s basically accounting on autopilot.

Free Trial Of Link My Books + Use Coupon Code VOVA20 To Get 50% OFF Link My Books for 3 Months

Connect More Than Just WooCommerce

One of my favorite things about Link My Books is that it’s multi-channel friendly.

That means you can use it if you’re also selling on other platforms like:

1. Amazon (including FBA)

2. Shopify

3. Etsy

4. Walmart

5. TikTok Shop

6. eBay

7. Square POS

So even if you’re managing several stores or marketplaces, you can keep all your accounting streamlined in one dashboard.

If you’re like me and running multi-channel setups, having one system that consolidates everything is a huge relief.

It simplifies reconciliation, reporting, and cash flow tracking across your sales channels.

Designed for Sellers, Accountants and Bookkeepers Alike

Here’s something not everyone realizes: Link My Books isn’t just for eCommerce sellers. 

It’s also a great tool for accountants and bookkeepers.

If you’re managing multiple clients or different stores across various platforms, Link My Books helps you organize each account cleanly through one subscription.

It automatically separates and summarizes data per channel, making it easy to generate accurate reports.

This means:

1. For sellers: You save hours of manual data entry every week and get instant clarity into profits and expenses.

2. For accountants/bookkeepers: You can handle multiple client accounts efficiently and reduce manual error.

I’ve even collaborated with Daniel Little, the co-founder of Link My Books, to record detailed tutorial videos showing how both sellers and accountants can set up and get the most out of it.

🎥 Watch My Tutorials:

-: For E-commerce Sellers :-

Or Read: Link My Books Tutorial: Elevate e-Commerce Accounting & Bookkeeping!

-: For Accountants And Bookkeepers :-

You can also check out my Link My Books YouTube Playlist for even more tips, walkthroughs, and examples.

Check Out My YouTube Playlist of Link My Books Videos

The Bottom Line

If you’re tired of late-night reconciliations and scattered spreadsheets, Link My Books can change that routine in minutes.

Once you connect WooCommerce to QuickBooks Online through the app, every sale, fee, refund, and tax line lands exactly where it belongs…

No copy-and-paste, no second-guessing.

In short, you get financial clarity on autopilot and free up brain space for the parts of your business that really need you.

Ready to breathe easier?

Tap the button below, set it up once, and let the numbers take care of themselves.

Free Trial Of Link My Books + Use Coupon Code VOVA20 To Get 50% OFF Link My Books for 3 Months

P.S. - I regularly publish new tutorials and updates about Link My Books. Here’s the most recent one: Does eBay Integrate With QuickBooks Online? Best Accounting & Bookkeeping Integration Software App